TransWikia.com

How are the scores of GeneSplicer, MaxEntScan and SpliceRegion interpreted from VEP annotations?

Bioinformatics Asked by Law on February 20, 2021

I am using VEP from Ensembl to annotate my VCF files with the extra plugins of GeneSplicer, MaxEntScan and SpliceRegion. However, I don’t fully understand the output of these scores.

I know that they are used for splicing predictions on trained sets.

  • What are the range of these values ?
  • What does a high or low value mean ?
  • What is the threshold ?

Can someone please explain them please ?

Add your own answers!

Ask a Question

Get help from others!

© 2024 TransWikia.com. All rights reserved. Sites we Love: PCI Database, UKBizDB, Menu Kuliner, Sharing RPP