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I have several sets of chip-seq data. I called the peaks using Macs2. I am pretty new to the field and I will appreciate any help. I wanted to annotate...
Asked on 08/26/2021
3 answerIs there anything known about the RNA structures of coronaviruses? More specifically - do they have any interesting known structures in the translatable region, like RRE of HIV or the...
Asked on 08/26/2021
1 answerI have heard several conspiracy theories regarding the origin of the new coronavirus, 2019-nCov. For example that the virus and/or SARS were produced in a laboratory or were some variant...
Asked on 08/25/2021 by Sscheme
1 answerI am pretty new to Seurat. I want to subset from my original seurat object (BC3) meta.data based on orig.ident. however, when i use subset(), it returns with Error.ER_HER_P...
Asked on 08/25/2021
2 answerI have a library I would like to split them based on their headers. Some are related to RNA and DNA. The header contains much information, but the most important...
Asked on 08/25/2021 by BioInfo
2 answerI'm dealing with a very large and sparse dataset and the first issues I met occurred when I tried to use quickCluster that reported me this error: ...
Asked on 08/22/2021
3 answerI am assembling a transcriptome obtained from the Internet. The transcriptome was extracted from a human cancer tissue that had been previously grafted into a mouse. I have detected that...
Asked on 08/22/2021 by juanjo75es
2 answerI want to categorize promoters based upon high, intermediate and low-CpG content (high-CpG-density promoters (HCPs), intermediate-CpG-density promoters(ICPs), and low-CpG-density promoters (LCPs)). So the data I have is for promoter which...
Asked on 08/22/2021 by krushnach Chandra
1 answerI have the following code to download data from the SRA using multithreading in Python. After running this a few times now (for testing purposes), I keep getting denied access...
Asked on 08/22/2021
1 answerI am downloading a large number of files from the ENA in Python using Multithreading. As an example, to be more concrete, I tried downloading 12 files simultaneously using 12...
Asked on 08/22/2021
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