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How to color based on b-factor for all the frames in one object in Pymol?

Biology Asked by lanselibai on January 31, 2021

I load a protein.pdb file into Pymol. This file has multiple frames (or states), and with different b-factor values at different frames at the PDB file b-factor columns.

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After running the spectrum b command, the colouring is only based on the last state of the object.

So can I colour the frames differently using their corresponding b-factor values? In that case, I can see the colour changing throughout the frame playing.

In case someone wants to create a PDB of multiple frames, you can do like this:

MODEL        1
ATOM ......
ATOM ......
ENDMDL
MODEL        2
ATOM ......
ATOM ......
ENDMDL

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