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Questions Tagged with "bam"

Explore solved questions tagged with "bam" or help others by answering their unsolved questions related to "bam".

Unable to open .bam file in C++ using SeqAn due to 'seqan::UnknownExtensionError'

3 answer

Bioinformatics Asked 1 year ago

Is there an efficient way to extract CIGAR strings for read pairs from bam files with python?

1 answer

Bioinformatics Asked 1 year ago by Mereven

Add tags to the read pairs in a bam file

1 answer

Bioinformatics Asked 1 year ago by SPPearce

BAM to gene expression matrix (UMI counts per gene per cell),10X

2 answer

Bioinformatics Asked 1 year ago by h3ab74

summarising read group information from a .bam file

0 answer

Bioinformatics Asked 1 year ago by user438383

Basic question about finding mRNA sequence in transcriptome

2 answer

Bioinformatics Asked 1 year ago

extract chimeric and multimap reads from bam file

1 answer

Bioinformatics Asked 1 year ago by SBDK8219

Nvidia Parabrick fq2bam pipeline error - No such file or directory

1 answer

Bioinformatics Asked 1 year ago

How do I find all supplementary mappings of a chimeric long (ONT) read mapped with NGMLR?

0 answer

Bioinformatics Asked 1 year ago by Liam McIntyre

Targeted hybrid capture bam files showing reads outside target regions in my bed file

1 answer

Bioinformatics Asked 2 years ago by trouselife

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